Insertion junction: CLIP2.028192_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.028192
Chromosome:chromosome 7
Location:4548948
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g344000 (1 of 1) PTHR31988:SF1 - 9-O-ACETYL-N-ACETYLNEURAMINIC ACID DEACETYLASE-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGTCGCCTCACGAAACATGCACACACATACACACACACACAAACGAGG
Internal bar code:AGTGGGGACGCTCTAGATCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:949
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCTACCACCCTTCCCCTC
Suggested primer 2:TGGGCAGGTGGTGAAAAAGT