Insertion junction: CLIP2.028194_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.028194
Chromosome:chromosome 2
Location:5902087
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g117600 5'UTR
Cre02.g117650 GT90F2,GT90-2 (1 of 4) PTHR12203//PTHR12203:SF35 - KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED // SUBFAMILY NOT NAMED; Glycosyltransferase GT90 family protein 2 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCACGCGGCGGATTGGCGCTACCCAGCAGGTCCCGTCAGGTCCCGTTCC
Internal bar code:TAGTGTTTACTGCAAATGTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2065
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTTCTGTGACGCAAGCTG
Suggested primer 2:TGACTGGCTTCACGTACCAC