Insertion junction: CLIP2.028200_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.028200
Chromosome:chromosome 3
Location:1404988
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g150800 (1 of 45) IPR029052 - Metallo-dependent phosphatase-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCTGTCCCCGCCCGCCCCACCTCCAGTCCATCAATCCAGTCGTGGTTG
Internal bar code:GGATCGTATTGACTGGTTCACA

Confirmation - LEAP-Seq

LEAP-Seq distance:834
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTTGAGTATGCGTTGCCG
Suggested primer 2:CGGGTAAGTATGGTCTCGGC