Insertion junction: CLIP2.028201_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.028201
Chromosome:chromosome 6
Location:6155266
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g291750 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCACTGCCGCAGGGTGAGGGGGGCGGCATGCGGCGTAACAGCGCCGGCA
Internal bar code:ATCGTTGTAAGGTTGACCGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1795
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGCATGAACATCTCGAAC
Suggested primer 2:GCTTGGATGCGCTTCTCATG