Insertion junction: CLIP2.028211_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.028211
Chromosome:chromosome 2
Location:4786388
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g108800 TPR10,DNJ26 (1 of 1) IPR001623//IPR019734 - DnaJ domain // Tetratricopeptide repeat; Tetratricopeptide-repeat protein 10 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTGCGCAAGGCCTACCGCCGCCTGGCGCTCAAGCACCACCCAGACAAG
Internal bar code:TGGGCGCCACGCTCTATTCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:694
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGGAGTAGGGGTTGGACG
Suggested primer 2:AGCAAGGTGATGTTCGCTCA