Insertion junction: CLIP2.028216_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.028216
Chromosome:chromosome 2
Location:6739943
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387652 GT90-41,GT90F41 GT90 family protein 41; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCGCTGAATCCTCGACGTACTTGCAAATGTTCTTGCCATTCTTGCCGG
Internal bar code:ACACTTGTATAGTTTTTATAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2800
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGCCTTTTTGCATTGGGT
Suggested primer 2:TCACAAGAGTCGGAACTGGC