Insertion junction: CLIP2.028224_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.028224
Chromosome:chromosome 16
Location:7974824
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g691552 NDA1 Type-II NADH dehydrogenase; (1 of 3) K17871 - NADH:ubiquinone reductase (non-electrogenic) (ndh1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGTAGGTAGGATACACTTGCACCGCACCTCAACGCAACGCACTGGGCT
Internal bar code:AGTTTTACTCGTAGGTGGAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:708
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACCTTTGGTATTCCCGG
Suggested primer 2:GCGGCATTCCTTTTAGAGCG