Insertion junction: CLIP2.028229_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.028229
Chromosome:chromosome 12
Location:7281513
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801466 (1 of 2) IPR028992 - Hedgehog/Intein (Hint) domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGGCGCAACGGCAAGAGCAGCCGGAATGCAGGACGCTGCTACCGCCGT
Internal bar code:TGTTTCTTGCATCTTTGTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3858
LEAP-Seq percent confirming:98.1481
LEAP-Seq n confirming:106
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:108

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCCATCCTCTTCTTGCA
Suggested primer 2:CTTCATCTGCGCATCATGCC