Insertion junction: CLIP2.028229_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.028229
Chromosome:chromosome 12
Location:7281515
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801466 (1 of 2) IPR028992 - Hedgehog/Intein (Hint) domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCCTCTGTGCTGCCTAGCCAGGGGCCCGCTGGCCGCGGCACTGCGCCG
Internal bar code:ACCCGGTTATTGTTATAAATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3773
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCATCTGCGCATCATGCC
Suggested primer 2:CCTGCCATCCTCTTCTTGCA