Insertion junction: CLIP2.028238_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.028238
Chromosome:chromosome 11
Location:3056965
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGCATGTCCGCCGCTGCCCCATACACACACGTTCTGACACCCCCGAC
Internal bar code:GGGTGAGGCTTGTGTGATGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2793
LEAP-Seq percent confirming:98.8506
LEAP-Seq n confirming:86
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:CCTAGACCCTTGCTTTCGCA
Suggested primer 2:TCCAGAAGCAGCCACAGAAG