Insertion junction: CLIP2.028239_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.028239
Chromosome:chromosome 16
Location:925240
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g648350 PDY2 (1 of 2) 1.5.5.2 - Proline dehydrogenase; Proline dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTCGCATGACCGACCGACTGGCTGACTCACGGGCTGGAAGTAGGAGTG
Internal bar code:GGGATTTCCTGGGAATGGGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:312
LEAP-Seq percent confirming:38.0952
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACAACGAGGTGGAGCTCATG
Suggested primer 2:CCCAACACAACGCGAACAAT