Insertion junction: CLIP2.028248_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.028248
Chromosome:chromosome 2
Location:1501472
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g084100 (1 of 24) IPR006553 - Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCAACAGAAGTTAAAATGTTACGCCATGTGGATACCGCACGCTGTGTG
Internal bar code:AGCGAGGTACTATGTTCAGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2943
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTACGCACATGCCATTCG
Suggested primer 2:CCTGGACCAGCTGCTTGTTA