Insertion junction: CLIP2.028262_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.028262
Chromosome:chromosome 12
Location:7537347
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g556400 (1 of 1) K08066 - nuclear transcription factor Y, gamma (NFYC) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCAGACACCTCGACCAGCTGTGCTTGCCAAAAAGACTTGAGCGCCTC
Internal bar code:TCTATCTCTCTTTATATCGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3502
LEAP-Seq percent confirming:90.566
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGTGTAGCTCTGCCAACC
Suggested primer 2:GTCCTAAACGCAGACCCACA