Insertion junction: CLIP2.028264_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.028264
Chromosome:chromosome 9
Location:4087754
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399178 CSN5 (1 of 1) K09613 - COP9 signalosome complex subunit 5 [EC:3.4.-.-] (COPS5, CSN5); COP signalosome subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATACCGTACCGGCTGAGCGGCCACGAAGGTTGAGCGACAGGCGATGCT
Internal bar code:GAGAACATGCGAAGACGGAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:499
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCCCAACACATACCCTC
Suggested primer 2:AAACCAACGAAAACGAGCGG