Insertion junction: CLIP2.028274_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.028274
Chromosome:chromosome 13
Location:2705537
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g581700 (1 of 6) 2.7.7.84 - 2'-5' oligoadenylate synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATTGCACCTGCTGAAACCACAGCGCGCCTAGCGTGCCTCGTTGCCTCA
Internal bar code:AAATCAGGTGTAGGGGGATACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1949
LEAP-Seq percent confirming:97.561
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTGTGCTTCTTGCCACAC
Suggested primer 2:AAACTCTTCAAACGTGCCGC