Insertion junction: CLIP2.028275_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.028275
Chromosome:chromosome 13
Location:61043
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g562200 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCGCTGGAGCTCCGGGCGCCCCGACTCCCGCTGCTTGTTGCTGCTGGC
Internal bar code:TTGTCTTCGTGCTCGTCACAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2091
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAGTCGATCCCAACTGAC
Suggested primer 2:CGTGCAAGATATGGCTTGGC