Insertion junction: CLIP2.028279_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.028279
Chromosome:chromosome 10
Location:5322480
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g456700 CASC3,EJC1 (1 of 1) PF09405 - CASC3/Barentsz eIF4AIII binding (Btz); Exon Junction Complex component CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATTTGAGGTGCCCACCTCCGGCGCCTTCTGGCTGCACGACGATCGATA
Internal bar code:ATATGTCGTGACTTCTGCCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:857
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGCTGAGATTGACCTGG
Suggested primer 2:CGATGACGATGTTGCAGCAG