Insertion junction: CLIP2.028280_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.028280
Chromosome:chromosome 8
Location:1090149
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g362500 (1 of 1) IPR016024//IPR027165 - Armadillo-type fold // Condensin complex subunit 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATCAGCGGGCTCAAAGCGAAAGGCGGCAGCAACCACCGCCTTCCAGCC
Internal bar code:AGTGGAGCAAGAGCTATCCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:526
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGCCGCAATAGGTTAGGT
Suggested primer 2:TCACGGGCTTGTGTACTGAC