Insertion junction: CLIP2.028287_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.028287
Chromosome:chromosome 3
Location:123571
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g143847 (1 of 3) PF07386 - Protein of unknown function (DUF1499) (DUF1499) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCGACCGCAACTGCTACGTTACCTTTGACGAGATAACCGCGCGCCAAG
Internal bar code:TTGTAGAGGGCGGTACGTCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5514
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:92
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:CGGAGTACCACGCCACTATC
Suggested primer 2:TGTCATGTTCTCGCAGCACT