Insertion junction: CLIP2.028290_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.028290
Chromosome:chromosome 3
Location:3111168
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g164450 (1 of 100) IPR001810 - F-box domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAGCCGCAGCGCCAGCCGCGTCAGATGCTGTCCCGGCGGCGACGCTGG
Internal bar code:CCGGGGTCTCGTGCTTGGACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1988
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTTCTCCCGAGCTGACAC
Suggested primer 2:GCCGTCCTCTGTCAGATAGC