Insertion junction: CLIP2.028290_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.028290
Chromosome:chromosome 14
Location:4084666
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g633650 PRP6 (1 of 1) PTHR11246:SF1 - PRE-MRNA-PROCESSING FACTOR 6; Splicing factor, component of the U4/U6-U5 snRNP complex intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCAATGAGTCTTGGCTGCGACCCGCTCACCCCTGACTACCCCTGTCC
Internal bar code:TCTAGGGTATAGTGTCGGTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:601
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GTCACACACACACACACACG
Suggested primer 2:ACTACCCTACACCCATCCCC