Insertion junction: CLIP2.028290_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.028290
Chromosome:chromosome 14
Location:4084681
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g633650 PRP6 (1 of 1) PTHR11246:SF1 - PRE-MRNA-PROCESSING FACTOR 6; Splicing factor, component of the U4/U6-U5 snRNP complex intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCTCTTACCTCCAGCAGCGCCCGTTCCTTGGCGCCGTCCCCTAGCTCC
Internal bar code:TCTAGGGTATAGTGTCGGTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1158
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:ACTACCCTACACCCATCCCC
Suggested primer 2:GTCACACACACACACACACG