Insertion junction: CLIP2.028294_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.028294
Chromosome:chromosome 11
Location:4341202
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g482700 (1 of 3) PF09011 - HMG-box domain (HMG_box_2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCGCTTGCCGCCCGCCACCTTCTCCTTGGCAGGCGCCTTGGCCTTGGG
Internal bar code:ACTGTTCGTTTTCGAACTTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1152
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGGCCGCTAAGAAGGAA
Suggested primer 2:CATGTCCGCAAAGCAGTAGC