Insertion junction: CLIP2.028295_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.028295
Chromosome:chromosome 2
Location:7201576
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g390801 (1 of 1) PTHR11918//PTHR11918:SF77 - RADICAL SAM PROTEINS // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAGGTCGCCGCCCTTGCTGAAGCGCAGCCGCAGCCGCTGCGTCTTGGC
Internal bar code:AAAATGAAAGATATTCGTACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1569
LEAP-Seq percent confirming:56.25
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CATAAGCACACCGGCGTTTG
Suggested primer 2:CCGCGATCATGCACTTTCAG