Insertion junction: CLIP2.028307_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.028307
Chromosome:chromosome 11
Location:509577
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467596 (1 of 7) IPR011335 - Restriction endonuclease type II-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGTGGTACGGGCGACTTGGACGAGAGGACTGGGTAGTGTAGCCCAATC
Internal bar code:GGCATCAGAGGAAATTCGTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1473
LEAP-Seq percent confirming:20.5128
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGTGTGTGTGCATGTGC
Suggested primer 2:CTCCCCCTCTCACTCCCTAC