Insertion junction: CLIP2.028307_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.028307
Chromosome:chromosome 11
Location:509824
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467596 (1 of 7) IPR011335 - Restriction endonuclease type II-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACACACGCCCACGCACACACGCGCCCACCCACCTGCGGCCCTCCCAC
Internal bar code:GGCATCAGAGGAAATTCGTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2804
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCCCCTCTCACTCCCTAC
Suggested primer 2:ATGTGTGTGTGTGCATGTGC