Insertion junction: CLIP2.028319_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.028319
Chromosome:chromosome 1
Location:5676067
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g040600 FAP327 Flagellar Associated Protein 327; (1 of 3) PTHR18937//PTHR18937:SF254 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTAGGATGCCAACACGTATGTCTGCTCTTCACAGGCGCGGCCTGCCGCT
Internal bar code:GGCACCCTGCGTTTTTCGTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1099
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAGCCATGCTACTCAACA
Suggested primer 2:TTTGTCCGTGTCGCGAACTA