Insertion junction: CLIP2.028324_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.028324
Chromosome:chromosome 3
Location:5215260
Confidence (%):63
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00234913

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTCCTAGTCAATGTCCCGTGATGGCTCCCCATTCCTCGGTCAATTCCC
Internal bar code:GCTATTATATCTCAGAGTACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2542
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGGATGCCGCATTTTAAG
Suggested primer 2:GCGTAGAGGACCGTTCTAGC