Insertion junction: CLIP2.028325_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.028325
Chromosome:chromosome 1
Location:1590126
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g008600 (1 of 1) IPR017993//IPR022751//IPR029044 - Atrophin-1 // Alpha-mannosyltransferase // Nucleotide-diphospho-sugar transferases intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCCCTTCCCATGAATGGCTAACCCCCACCTCCCCCACCTCCCCCACCG
Internal bar code:CGTAGCCACGGTGTAGTTCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:48
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CACCGCACCATCAACAAGTG
Suggested primer 2:ACTCGTGGGCCAGGTAGTAT