Insertion junction: CLIP2.028327_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.028327
Chromosome:chromosome 8
Location:1635072
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g365825 (1 of 1) 1.14.99.42 - Zeaxanthin 7,8-dioxygenase / Zeaxanthin 7,8(7',8')-cleavage dioxygenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGGTTTGGTCGCTTTTGGGTGTATTCGCTCGATTACTTGGCCGCCAGG
Internal bar code:GCTTTCGTAAGTCGCATCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:649
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TATTTGGTTTTGCGCCGTCG
Suggested primer 2:TGGCGTGAATTTGGCTGTTG