Insertion junction: CLIP2.028333_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.028333
Chromosome:chromosome 5
Location:1096602
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g248050 (1 of 1) IPR012889 - L-fucose isomerase, N-terminal-2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCCACAGTATGGTAACCGGCAAAGCTTTTGGTCAGGGATTTGCGCCCC
Internal bar code:TATCACGTCAACGCGGGTCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:944
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGATGGGACTTCAGGCTTGC
Suggested primer 2:AGAAAGCCCACCCAATCGAG