Insertion junction: CLIP2.028340_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.028340
Chromosome:chromosome 17
Location:4595572
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g732200 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCATGTGCCGCCGGGTCCGGGGCCGCAGCAGCGACAGCAGGAGCCGCGG
Internal bar code:GGCCAGGCTTAGACTGGTTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:694
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CCTACGGCCTATTCCACGAC
Suggested primer 2:TGAGAGCAGCAAGGAACCAG