Insertion junction: CLIP2.028351_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.028351
Chromosome:chromosome 10
Location:203599
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g419050 ATP1B Mitochondrial F1F0 ATP synthase, alpha subunit; (1 of 2) PTHR15184:SF3 - ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTCACCCTGCGGTGCCTGTGAGGAAGGACACCTTGGTGCCCAACGGCG
Internal bar code:TACGTATTATGTCGTGGGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:405
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGTTCAATCAATCGGCAC
Suggested primer 2:CCGTAACTCCATACTCCGCC