Insertion junction: CLIP2.028354_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.028354
Chromosome:chromosome 12
Location:5715239
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g532250 (1 of 12) IPR000595//IPR018490 - Cyclic nucleotide-binding domain // Cyclic nucleotide-binding-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGACGGCGGCGCCGGAAGCGGGCCGGTGGCCACAGTGTCCTTGTCAGG
Internal bar code:CACATTTGTATTTTGAAATATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2958
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCTGTTGTGACGCTGCTG
Suggested primer 2:ACATTGGTCGTTTGCTGCAC