Insertion junction: CLIP2.028354_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.028354
Chromosome:chromosome 12
Location:5715240
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g532250 (1 of 12) IPR000595//IPR018490 - Cyclic nucleotide-binding domain // Cyclic nucleotide-binding-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTGCGGCTGGTGCCACTGCTGCTTGCACCAGTCCCAGTCCGCCCAAGA
Internal bar code:CACATTTGTATTTTGAAATATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2511
LEAP-Seq percent confirming:97.7273
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:ACATTGGTCGTTTGCTGCAC
Suggested primer 2:GTTCTGTTGTGACGCTGCTG