Insertion junction: CLIP2.028365_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.028365
Chromosome:chromosome 3
Location:2489538
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g159300 (1 of 2) PF05255 - Uncharacterised protein family (UPF0220) (UPF0220) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTGTCTGCAGAGCGGCGTGCTTCAGAGCTGCCTGGTGGTGGCCAGCG
Internal bar code:ATAGGGATGACATGTAATACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4155
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAGCCTCAATCCCTATCC
Suggested primer 2:GGACAGGCGCTCAAGTAACT