Insertion junction: CLIP2.028388_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.028388
Chromosome:chromosome 12
Location:5767547
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g532650 (1 of 1) PTHR21394:SF0 - MAU2 CHROMATID COHESION FACTOR HOMOLOG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGGCTGGGGTCACATCCGAGGCAACACGCGACGGCTTGGCTTCCTGTC
Internal bar code:GTGAACATTCACTTGGAGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1541
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGGGATTGCTGCATGTAA
Suggested primer 2:CTCGCTCCAGCCTTCTTTCA