Insertion junction: CLIP2.028390_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.028390
Chromosome:chromosome 7
Location:2644385
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g330500 (1 of 5) PF04232 - Stage V sporulation protein S (SpoVS) (SpoVS) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGCTGGTAGAACGGAGGTCTTGCGACACTGGTCCTACCTCTTGCGCA
Internal bar code:AAGGGTTTAGGCCAGGAAAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:3063
LEAP-Seq percent confirming:98.3607
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAATGAACGGCACCAAAG
Suggested primer 2:GGAGGATTGGCTGCCTTTCT