Insertion junction: CLIP2.028394_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.028394
Chromosome:chromosome 12
Location:7011336
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g560668 (1 of 9) IPR000719//IPR002290//IPR011009//IPR020635//IPR027916 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // Protein kinase-like domain, Apicomplexa intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTAATACACGCCTCCACTGAACCGAGAGCGCAACCTTGCACGATCACTA
Internal bar code:GCATGTCTTTGAAAGCCCCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2855
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:91
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:98

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGCTCTTTCGTTTGCAGC
Suggested primer 2:TTGGCGCAACATGTCATGTG