Insertion junction: CLIP2.028404_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.028404
Chromosome:chromosome 17
Location:2807737
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g718250 DRR1 (1 of 1) PTHR10491 - DTDP-4-DEHYDRORHAMNOSE REDUCTASE; dTDP-4-dehydrorhamnose reductase CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCGGCACCGGGGTGTGCGGCAGTGGGGTTACATTAACGATGAGTTAAT
Internal bar code:TGGGTATTCCGAGTTCTGAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1379
LEAP-Seq percent confirming:73.3333
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGTGTTGAACGTGTGCT
Suggested primer 2:CAGGAGGGCAAGTCCAAGAG