Insertion junction: CLIP2.028405_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.028405
Chromosome:chromosome 13
Location:2766439
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g582270 FFT3 putative fructan fructosyltransferase; (1 of 1) IPR001362//IPR013148//IPR023296 - Glycoside hydrolase, family 32 // Glycosyl hydrolase family 32, N-terminal // Glycosyl hydrolase, five-bladed beta-propellor domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCGCCGCCGCCTGCTACAGCCTCCTGCAGTGTCGCCCCCGAGACCTCT
Internal bar code:TTATCTGCGTGGTTAAAGTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1218
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCTTCCCATACCCAAACC
Suggested primer 2:GCTACCGCTGATTTCATGGC