Insertion junction: CLIP2.028421_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.028421
Chromosome:chromosome 12
Location:6287155
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g536600 FAP78 Flagellar Associated Protein 78; (1 of 7) PTHR11584:SF381 - PROTEIN PQN-80, ISOFORM B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCCTGGTCGCATCCATCTGCATGTTCATGGTGGATGACGACGGCGTGC
Internal bar code:GGTTTAAAATGCGATCTTGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2397
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CCACTACACCCAGCCCATTT
Suggested primer 2:ACGATTGTCATCCCTGGCAG