Insertion junction: CLIP2.028422_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.028422
Chromosome:chromosome 13
Location:3349342
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g586450 NAT31 N-acetyltransferase; (1 of 5) PF13508 - Acetyltransferase (GNAT) domain (Acetyltransf_7) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCACACCACATCCGCACTGTCGCTGTCGCCGCCGCTGCGGGGCGTCTC
Internal bar code:AGGCTACGTGTGATGTTTATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1647
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GGACACAGAAGTCGCTGTCA
Suggested primer 2:CTCACAGGTCTTTGGCGTCT