Insertion junction: CLIP2.028424_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.028424
Chromosome:chromosome 1
Location:6034486
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g042550 (1 of 1) PTHR21573:SF0 - ER MEMBRANE PROTEIN COMPLEX SUBUNIT 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCCTCGTACCACTGCCCACAAAGCGCCCAGGTGGGACAAGGGTTTCCG
Internal bar code:GCTTGCGCTATACACGTCGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3225
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGGAAGTCACTTCAGACA
Suggested primer 2:AGGAGTCAACAAGGCATCGG