Insertion junction: CLIP2.028426_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.028426
Chromosome:chromosome 3
Location:5515700
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g184900 (1 of 1) IPR027417//IPR029060 - P-loop containing nucleoside triphosphate hydrolase // PIN domain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCGAGGAGCTGAAGGCGGAGTGGCGGGCGGCGGACAGGCCGGTGCCTG
Internal bar code:GTGGGGGTGTGGCAGGGGAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:990
LEAP-Seq percent confirming:28.125
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACGCGCAAACTTTCTC
Suggested primer 2:CTGAGGCCTAGTGCATACCG