Insertion junction: CLIP2.028436_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.028436
Chromosome:chromosome 6
Location:4911722
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g280800 (1 of 1) K11291 - nuclear autoantigenic sperm protein (NASP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGGGGTGCTGGACATCATGCGCCTTTCAGGCAGGGGCTTTCGTGAAGG
Internal bar code:ATTCATTCCATCGGCTTGGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1835
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGAAAGCAGGAGCACCTACG
Suggested primer 2:TGAAGCTGGCTTGGGAGATG