Insertion junction: CLIP2.028440_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.028440
Chromosome:chromosome 10
Location:449188
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g420800 C1d-HC2,FAP46 Flagellar central pair-associated protein 46; (1 of 1) PTHR15977//PTHR15977:SF16 - FAMILY NOT NAMED // E030019B06RIK PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGTCATGTCGCTCCAGGTGCGCGGGCCGCTGTCGCTGGAGGCAGCGGC
Internal bar code:TCTGACGCTCACAAGAGCCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1268
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGGAAGGTGCGCATCTAC
Suggested primer 2:TTAGCCAGTGATGCAAGGGG