Insertion junction: CLIP2.028450_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.028450
Chromosome:chromosome 10
Location:3427144
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g444150 (1 of 2) IPR007743//IPR027417//IPR030385 - Immunity-related GTPases-like // P-loop containing nucleoside triphosphate hydrolase // IRG-type guanine nucleotide-binding (G) domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACACTGATCACACTGCTTGTTGTATGGGTCCTCCAGTCCAGGATGCTCC
Internal bar code:ACGGGTGATGGCTCGCGGGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1550
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTTCGCATGAGAGCAGTT
Suggested primer 2:CTCGTGCATGCGTGTGTATG