Insertion junction: CLIP2.028460_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.028460
Chromosome:chromosome 16
Location:2872673
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g663000 THB12,PRX (1 of 6) PTHR10681//PTHR10681:SF118 - THIOREDOXIN PEROXIDASE // SUBFAMILY NOT NAMED; Truncated hemoglobin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGATGAAGGCGGATTGTTTGGCCCGCAGGTGCGTCATTTCTTGATCGTG
Internal bar code:CACGGGTTTCACCACCAAGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1302
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACTGTCAGCAACTCCGT
Suggested primer 2:TTGAGGGAGGCTTGATGCAG