Insertion junction: CLIP2.028469_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.028469
Chromosome:chromosome 9
Location:85726
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g386300 CSB34TNP22,TNP22 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon); {"Probable transposon-derived protein of Chlamydomonas-Specific family B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTGCAACGACTGCTTGACGACCTGGGTGAGGACCGTGCATGTGCGGGG
Internal bar code:TATACTCTTAAGTGGCTTGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1248
LEAP-Seq percent confirming:75.6098
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCTCCCTACGTCAACGGA
Suggested primer 2:GGGCCGATTCCATATGAGCA